Showing posts with label new technologies. Show all posts
Showing posts with label new technologies. Show all posts

Sunday, January 22, 2017

MySQL Group Replication vs. Multi Source

In my previous post, we saw the usage of MySQL Group Replication (MGR) in single-primary mode. We know that Oracle does not recommends using MGR in multi-primary mode, but there is so much in the documentation and in presentations about MGR behavior in multi-primary, that I feel I should really give it a try, and especially compare this technology with the already existing multiple master solution introduced in 5.7: multi-source replication.

Installation

To this extent, I will set up two clusters using MySQL-Sandbox. The instructions for MGR in the manual use three nodes in the same host without using MySQL Sandbox. Here we can see that using MySQL-Sandbox simplifies operations considerably (the scripts are available in GitHub):

Group replication

# ----------------------------------------------------------------------------
#!/bin/bash
# mm_gr.sh : installs MySQL Group Replication
MYSQL_VERSION=$1
[ -z "$MYSQL_VERSION" ] && MYSQL_VERSION=5.7.17

make_multiple_sandbox --gtid --group_directory=GR $MYSQL_VERSION

if [ "$?" != "0" ] ; then exit 1 ; fi
multi_sb=$HOME/sandboxes/GR
baseport=$($multi_sb/n1 -BN -e 'select @@port')
baseport=$(($baseport+99))

port1=$(($baseport+1))
port2=$(($baseport+2))
port3=$(($baseport+3))
for N in 1 2 3
do
    myport=$(($baseport+N))
    options=(
        binlog_checksum=NONE
        log_slave_updates=ON
        plugin-load=group_replication.so
        group_replication=FORCE_PLUS_PERMANENT
        group_replication_start_on_boot=OFF
        group_replication_bootstrap_group=OFF
        transaction_write_set_extraction=XXHASH64
        report-host=127.0.0.1
        loose-group_replication_group_name="aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee"
        loose-group_replication_local_address="127.0.0.1:$myport"
        loose-group_replication_group_seeds="127.0.0.1:$port1,127.0.0.1:$port2,127.0.0.1:$port3"
        loose-group-replication-single-primary-mode=off
    )
    $multi_sb/node$N/add_option ${options[*]}

    user_cmd='reset master;'
    user_cmd="$user_cmd CHANGE MASTER TO MASTER_USER='rsandbox', MASTER_PASSWORD='rsandbox' FOR CHANNEL 'group_replication_recovery';"
    $multi_sb/node$N/use -v -u root -e "$user_cmd"
done

START_CMD="SET GLOBAL group_replication_bootstrap_group=ON;"
START_CMD="$START_CMD START GROUP_REPLICATION;"
START_CMD="$START_CMD SET GLOBAL group_replication_bootstrap_group=OFF;"
$multi_sb/n1 -v -e "$START_CMD"
sleep 1
$multi_sb/n2 -v -e 'START GROUP_REPLICATION;'
sleep 1
$multi_sb/n3 -v -e 'START GROUP_REPLICATION;'
sleep 1
$multi_sb/use_all 'select * from performance_schema.replication_group_members'
# ----------------------------------------------------------------------------

Using this script, we get a cluster with MGR up and running. Here's a trimmed-out sample of its output:

$ ./mm_gr.sh
installing node 1
installing node 2
installing node 3
group directory installed in $HOME/sandboxes/GR
# option 'binlog_checksum=NONE' added to configuration file
# option 'log_slave_updates=ON' added to configuration file
# option 'plugin-load=group_replication.so' added to configuration file
# option 'group_replication=FORCE_PLUS_PERMANENT' added to configuration file
# option 'group_replication_start_on_boot=OFF' added to configuration file
# option 'group_replication_bootstrap_group=OFF' added to configuration file
# option 'transaction_write_set_extraction=XXHASH64' added to configuration file
# option 'loose-group_replication_group_name=aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee' added to configuration file
# option 'loose-group_replication_local_address=127.0.0.1:14518' added to configuration file
# option 'loose-group_replication_group_seeds=127.0.0.1:14518,127.0.0.1:14519,127.0.0.1:14520' added to configuration file
# option 'loose-group-replication-single-primary-mode=off' added to configuration file
.. sandbox server started
reset master
CHANGE MASTER TO MASTER_USER='rsandbox', MASTER_PASSWORD='rsandbox' FOR CHANNEL 'group_replication_recovery'

# [ ...]
.. sandbox server started
reset master
CHANGE MASTER TO MASTER_USER='rsandbox', MASTER_PASSWORD='rsandbox' FOR CHANNEL 'group_replication_recovery'

# [...]
.. sandbox server started
reset master
CHANGE MASTER TO MASTER_USER='rsandbox', MASTER_PASSWORD='rsandbox' FOR CHANNEL 'group_replication_recovery'

SET GLOBAL group_replication_bootstrap_group=ON
START GROUP_REPLICATION
SET GLOBAL group_replication_bootstrap_group=OFF
--------------

--------------
START GROUP_REPLICATION
--------------
START GROUP_REPLICATION
--------------

Multi-source replication

We have a similar (but much shorter) script to run multi-source replication in sandboxes.

# ----------------------------------------------------------------------------
#!/bin/bash
# mm_ms.sh : installs MySQL multi-source replication
MYSQL_VERSION=$1
[ -z "$MYSQL_VERSION" ] && MYSQL_VERSION=5.7.16

make_multiple_sandbox --gtid --group_directory=MS $MYSQL_VERSION

if [ "$?" != "0" ] ; then exit 1 ; fi
multi_sb=$HOME/sandboxes/MS

$multi_sb/use_all 'reset master'

for N in 1 2 3
do
    user_cmd=''
    for node in 1 2 3
    do
        if [ "$node" != "$N" ]
        then
            master_port=$($multi_sb/n$node -BN -e 'select @@port')
            user_cmd="$user_cmd CHANGE MASTER TO MASTER_USER='rsandbox', "
            user_cmd="$user_cmd MASTER_PASSWORD='rsandbox', master_host='127.0.0.1', "
            user_cmd="$user_cmd master_port=$master_port FOR CHANNEL 'node$node';"
            user_cmd="$user_cmd START SLAVE FOR CHANNEL 'node$node';"
        fi
    done
    $multi_sb/node$N/use -v -u root -e "$user_cmd"
done
# ----------------------------------------------------------------------------

Sample run:

$ ./mm_ms.sh
installing node 1
installing node 2
installing node 3
group directory installed in $HOME/sandboxes/MS
# server: 1:
# server: 2:
# server: 3:
--------------
CHANGE MASTER TO MASTER_USER='rsandbox',  MASTER_PASSWORD='rsandbox', master_host='127.0.0.1',  master_port=14318 FOR CHANNEL 'node2'
START SLAVE FOR CHANNEL 'node2'
CHANGE MASTER TO MASTER_USER='rsandbox',  MASTER_PASSWORD='rsandbox', master_host='127.0.0.1',  master_port=14319 FOR CHANNEL 'node3'
START SLAVE FOR CHANNEL 'node3'

--------------
CHANGE MASTER TO MASTER_USER='rsandbox',  MASTER_PASSWORD='rsandbox', master_host='127.0.0.1',  master_port=14317 FOR CHANNEL 'node1'
START SLAVE FOR CHANNEL 'node1'
CHANGE MASTER TO MASTER_USER='rsandbox',  MASTER_PASSWORD='rsandbox', master_host='127.0.0.1',  master_port=14319 FOR CHANNEL 'node3'
START SLAVE FOR CHANNEL 'node3'

--------------
CHANGE MASTER TO MASTER_USER='rsandbox',  MASTER_PASSWORD='rsandbox', master_host='127.0.0.1',  master_port=14317 FOR CHANNEL 'node1'
START SLAVE FOR CHANNEL 'node1'
CHANGE MASTER TO MASTER_USER='rsandbox',  MASTER_PASSWORD='rsandbox', master_host='127.0.0.1',  master_port=14318 FOR CHANNEL 'node2'
START SLAVE FOR CHANNEL 'node2'
--------------

Simple test data

Finally, we have a script that will create one table for each node and insert one record.


# ----------------------------------------------------------------------------     
#!/bin/bash
multi_sb=$1
if [ -z "$multi_sb" ]
then
    echo multiple sandbox path needed
    exit 1
fi
if [ ! -d $multi_sb ]
then
    echo directory $multi_sb not found
    exit 1
fi
if [ ! -d "$multi_sb/node3" ]
then
    echo directory $multi_sb/node3 not found
    exit 1
fi
cd $multi_sb

for N in  1 2 3 ; do
    ./n$N -e "create schema if not exists test"
    ./n$N -e "drop table if exists test.t$N"
    ./n$N -e "create table test.t$N(id int not null primary key, sid int)"
    ./n$N -e "insert into  test.t$N values ($N, @@server_id)"
done

./use_all 'select * from test.t1 union select * from test.t2 union select * from test.t3'
# ----------------------------------------------------------------------------

We run the script in both clusters, and at the end we'll have the test database with three tables, each one created and filled by a different node.

Checking replication status

The old topology: multi-source

Let's start with the the old technology, so we can easily compare it with the new one.

node1 [localhost] {msandbox} (performance_schema) > select * from replication_connection_status\G
*************************** 1. row ***************************
             CHANNEL_NAME: node2
               GROUP_NAME:
              SOURCE_UUID: 00014318-2222-2222-2222-222222222222   # ----
                THREAD_ID: 32
            SERVICE_STATE: ON
COUNT_RECEIVED_HEARTBEATS: 244
 LAST_HEARTBEAT_TIMESTAMP: 2017-01-22 13:31:54
 RECEIVED_TRANSACTION_SET: 00014318-2222-2222-2222-222222222222:1-4
        LAST_ERROR_NUMBER: 0
       LAST_ERROR_MESSAGE:
     LAST_ERROR_TIMESTAMP: 0000-00-00 00:00:00
*************************** 2. row ***************************
             CHANNEL_NAME: node3
               GROUP_NAME:
              SOURCE_UUID: 00014319-3333-3333-3333-333333333333   # ----
                THREAD_ID: 34
            SERVICE_STATE: ON
COUNT_RECEIVED_HEARTBEATS: 244
 LAST_HEARTBEAT_TIMESTAMP: 2017-01-22 13:31:55
 RECEIVED_TRANSACTION_SET: 00014319-3333-3333-3333-333333333333:1-4
        LAST_ERROR_NUMBER: 0
       LAST_ERROR_MESSAGE:
     LAST_ERROR_TIMESTAMP: 0000-00-00 00:00:00
2 rows in set (0.00 sec)

Notice that we are benefitting from a feature of MySQL-Sandbox that creates a more readable version of the server UUID. This way we can easily identify the nodes. Here we see that each transaction set has a clearly defined origin. We can see similar information in the replication tables from the mysql database:

node1 [localhost] {msandbox} (mysql) > select * from slave_master_info\G
*************************** 1. row ***************************
       Number_of_lines: 25
       Master_log_name: mysql-bin.000001
        Master_log_pos: 154
                  Host: 127.0.0.1       # ----
             User_name: rsandbox
         User_password: rsandbox
                  Port: 14318           # ----
         Connect_retry: 60
           Enabled_ssl: 0
Ssl_verify_server_cert: 0
             Heartbeat: 30
                  Bind:
    Ignored_server_ids: 0
                  Uuid: 00014318-2222-2222-2222-222222222222  # ----
           Retry_count: 86400
           Ssl_crlpath:
 Enabled_auto_position: 0
          Channel_name: node2
           Tls_version:
*************************** 2. row ***************************
       Number_of_lines: 25
       Master_log_name: mysql-bin.000001
        Master_log_pos: 154
                  Host: 127.0.0.1    # ----
             User_name: rsandbox
         User_password: rsandbox
                  Port: 14319        # ----
         Connect_retry: 60
           Enabled_ssl: 0
Ssl_verify_server_cert: 0
             Heartbeat: 30
                  Bind:
    Ignored_server_ids: 0
                  Uuid: 00014319-3333-3333-3333-333333333333  # ----
           Retry_count: 86400
           Ssl_crlpath:
 Enabled_auto_position: 0
          Channel_name: node3
           Tls_version:
2 rows in set (0.00 sec)

Additionally, we have SHOW SLAVE STATUS, which, although not the ideal monitoring tool, is still the only place where we can see at once both the received and executed transactions, and the corresponding binary log and relay log records.

Here's an abridged version:

node1 [localhost] {msandbox} (performance_schema) > SHOW SLAVE STATUS\G
*************************** 1. row ***************************
               Slave_IO_State: Waiting for master to send event
                  Master_Host: 127.0.0.1
                  Master_User: rsandbox
                  Master_Port: 14318
                Connect_Retry: 60
              Master_Log_File: mysql-bin.000001
          Read_Master_Log_Pos: 965
               Relay_Log_File: mysql-relay-node2.000002
                Relay_Log_Pos: 1178
        Relay_Master_Log_File: mysql-bin.000001
             Slave_IO_Running: Yes
            Slave_SQL_Running: Yes
          Exec_Master_Log_Pos: 965
              Relay_Log_Space: 1387
             Master_Server_Id: 102
                  Master_UUID: 00014318-2222-2222-2222-222222222222
             Master_Info_File: mysql.slave_master_info
      Slave_SQL_Running_State: Slave has read all relay log; waiting for more updates
           Master_Retry_Count: 86400
           Retrieved_Gtid_Set: 00014318-2222-2222-2222-222222222222:1-4
            Executed_Gtid_Set: 00014317-1111-1111-1111-111111111111:1-4,
00014318-2222-2222-2222-222222222222:1-4,
00014319-3333-3333-3333-333333333333:1-4
                 Channel_Name: node2
*************************** 2. row ***************************
               Slave_IO_State: Waiting for master to send event
                  Master_Host: 127.0.0.1
                  Master_User: rsandbox
                  Master_Port: 14319
                Connect_Retry: 60
              Master_Log_File: mysql-bin.000001
          Read_Master_Log_Pos: 965
               Relay_Log_File: mysql-relay-node3.000002
                Relay_Log_Pos: 1178
        Relay_Master_Log_File: mysql-bin.000001
             Slave_IO_Running: Yes
            Slave_SQL_Running: Yes
          Exec_Master_Log_Pos: 965
              Relay_Log_Space: 1387
              Until_Condition: None
             Master_Server_Id: 103
                  Master_UUID: 00014319-3333-3333-3333-333333333333
             Master_Info_File: mysql.slave_master_info
      Slave_SQL_Running_State: Slave has read all relay log; waiting for more updates
           Master_Retry_Count: 86400
           Retrieved_Gtid_Set: 00014319-3333-3333-3333-333333333333:1-4
            Executed_Gtid_Set: 00014317-1111-1111-1111-111111111111:1-4,
00014318-2222-2222-2222-222222222222:1-4,
00014319-3333-3333-3333-333333333333:1-4
                 Channel_Name: node3
2 rows in set (0.00 sec)

Finally, we'll have a look at the data itself:

node1 [localhost] {msandbox} (mysql) > show binlog events;
+------------------+-----+----------------+-----------+-------------+-------------------------------------------------------------------+
| Log_name         | Pos | Event_type     | Server_id | End_log_pos | Info                                                              |
+------------------+-----+----------------+-----------+-------------+-------------------------------------------------------------------+
| mysql-bin.000001 |   4 | Format_desc    |       101 |         123 | Server ver: 5.7.16-log, Binlog ver: 4                             |
| mysql-bin.000001 | 123 | Previous_gtids |       101 |         154 |                                                                   |
| mysql-bin.000001 | 154 | Gtid           |       101 |         219 | SET @@SESSION.GTID_NEXT= '00014317-1111-1111-1111-111111111111:1' |
| mysql-bin.000001 | 219 | Query          |       101 |         325 | create schema if not exists test                                  |
| mysql-bin.000001 | 325 | Gtid           |       101 |         390 | SET @@SESSION.GTID_NEXT= '00014317-1111-1111-1111-111111111111:2' |
| mysql-bin.000001 | 390 | Query          |       101 |         518 | DROP TABLE IF EXISTS `test`.`t1` /* generated by server */        |
| mysql-bin.000001 | 518 | Gtid           |       101 |         583 | SET @@SESSION.GTID_NEXT= '00014317-1111-1111-1111-111111111111:3' |
| mysql-bin.000001 | 583 | Query          |       101 |         711 | create table test.t1(id int not null primary key, sid int)        |
| mysql-bin.000001 | 711 | Gtid           |       101 |         776 | SET @@SESSION.GTID_NEXT= '00014317-1111-1111-1111-111111111111:4' |
| mysql-bin.000001 | 776 | Query          |       101 |         844 | BEGIN                                                             |
| mysql-bin.000001 | 844 | Table_map      |       101 |         890 | table_id: 108 (test.t1)                                           |
| mysql-bin.000001 | 890 | Write_rows     |       101 |         934 | table_id: 108 flags: STMT_END_F                                   |
| mysql-bin.000001 | 934 | Xid            |       101 |         965 | COMMIT /* xid=72 */                                               |
+------------------+-----+----------------+-----------+-------------+-------------------------------------------------------------------+
13 rows in set (0.00 sec)

The binary log contains only the data produced in this node.

The new topology: MGR

Turning to the new software, let's first check whether replication is working. An important note here: SHOW SLAVE STATUS is not available in MGR. That's not entirely true. The channel architecture used for multi-master has been hijacked to convey information about group problems. If something goes wrong during the setup, you will find the information in the groupreplicationrecovery channel.

node1 [localhost] {msandbox} (performance_schema) > SHOW SLAVE STATUS for channel 'group_replication_recovery';
Empty set (0.00 sec)

When things are fine, the tables in performance_schema report a satisfactory status:

node1 [localhost] {msandbox} (performance_schema) > select * from replication_group_members;
+---------------------------+--------------------------------------+-------------+-------------+--------------+
| CHANNEL_NAME              | MEMBER_ID                            | MEMBER_HOST | MEMBER_PORT | MEMBER_STATE |
+---------------------------+--------------------------------------+-------------+-------------+--------------+
| group_replication_applier | 00014418-1111-1111-1111-111111111111 | gmini       |       14418 | ONLINE       |
| group_replication_applier | 00014419-2222-2222-2222-222222222222 | gmini       |       14419 | ONLINE       |
| group_replication_applier | 00014420-3333-3333-3333-333333333333 | gmini       |       14420 | ONLINE       |
+---------------------------+--------------------------------------+-------------+-------------+--------------+

The above command tells us that all nodes are online.

Next, we ask what are the stats of the current member.

node1 [localhost] {msandbox} (performance_schema) > select * from replication_group_member_stats\G
*************************** 1. row ***************************
                      CHANNEL_NAME: group_replication_applier
                           VIEW_ID: 14850806532423012:3
                         MEMBER_ID: 00014418-1111-1111-1111-111111111111
       COUNT_TRANSACTIONS_IN_QUEUE: 0
        COUNT_TRANSACTIONS_CHECKED: 12
          COUNT_CONFLICTS_DETECTED: 0
COUNT_TRANSACTIONS_ROWS_VALIDATING: 0
TRANSACTIONS_COMMITTED_ALL_MEMBERS: aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:1-7:1000003-1000006:2000003-2000006
    LAST_CONFLICT_FREE_TRANSACTION: aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:2000006
1 row in set (0.00 sec)

The same operation from a different member will give a very similar result.

node2 [localhost] {msandbox} (performance_schema) > select * from replication_group_member_stats\G
*************************** 1. row ***************************
                      CHANNEL_NAME: group_replication_applier
                           VIEW_ID: 14850806532423012:3
                         MEMBER_ID: 00014419-2222-2222-2222-222222222222
       COUNT_TRANSACTIONS_IN_QUEUE: 0
        COUNT_TRANSACTIONS_CHECKED: 12
          COUNT_CONFLICTS_DETECTED: 0
COUNT_TRANSACTIONS_ROWS_VALIDATING: 0
TRANSACTIONS_COMMITTED_ALL_MEMBERS: aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:1-7:1000003-1000006:2000003-2000006
    LAST_CONFLICT_FREE_TRANSACTION: aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:2000006
1 row in set (0.00 sec)

Then, we check the more classical replication status:

node1 [localhost] {msandbox} (performance_schema) > select * from replication_connection_status\G
*************************** 1. row ***************************
             CHANNEL_NAME: group_replication_applier
               GROUP_NAME: aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee
              SOURCE_UUID: aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee    # ----
                THREAD_ID: NULL
            SERVICE_STATE: ON
COUNT_RECEIVED_HEARTBEATS: 0
 LAST_HEARTBEAT_TIMESTAMP: 0000-00-00 00:00:00
 RECEIVED_TRANSACTION_SET: aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:1-7:1000003-1000006:2000003-2000006
        LAST_ERROR_NUMBER: 0
       LAST_ERROR_MESSAGE:
     LAST_ERROR_TIMESTAMP: 0000-00-00 00:00:00
1 row in set (0.00 sec)

There are a few things that strike the observer immediately:

  • As we saw in the single-primary topology, all transactions bear the UUID of the group, not of the server that generated them. While in single-primary mode this could be considered an asset, as it simplifies a failover procedure, in multi-primary mode I consider it to be a loss. We lose the knowledge of the transaction provenience. As you can see, the SOURCE_UUID field shows the group ID instead of the node.
  • The GTID numbers look odd. There is a set that stars at 1, another set that starts at 1 million, and a third one that starts at 2 million. What's going on? The answer is in the value of group_replication_gtid_assignment_block_size, which determines the block of values for each node. When the values in the block are exhausted, the node allocates another block. Someone could naively think that we could use this block to identify which node the data comes from, but this would be ultimately wrong for two reasons:
    • The blocks are assigned on a first-come-first-served basis. If we start operations in node 2, its transactions will bear the lowest numbers.
    • When the blocks are exhausted, the node starts a new block, meaning that with a busy cluster we will have hard time identifying which nodes uses which block.

If someone thought that we could get some more information from the replication tables in mysql, they are in for a disappointment:

node2 [localhost] {msandbox} (mysql) > select * from slave_master_info\G
*************************** 1. row ***************************
       Number_of_lines: 25
       Master_log_name:
        Master_log_pos: 4
                  Host: <NULL>            # ----
             User_name:
         User_password:
                  Port: 0                 # ----
         Connect_retry: 60
           Enabled_ssl: 0
Ssl_verify_server_cert: 0
             Heartbeat: 30
                  Bind:
    Ignored_server_ids: 0
                  Uuid:                   # ----
           Retry_count: 86400
 Enabled_auto_position: 1
          Channel_name: group_replication_applier
           Tls_version:
*************************** 2. row ***************************
       Number_of_lines: 25
       Master_log_name:
        Master_log_pos: 4
                  Host: <NULL>
             User_name: rsandbox
         User_password: rsandbox
                  Port: 0
         Connect_retry: 60
           Enabled_ssl: 0
Ssl_verify_server_cert: 0
             Heartbeat: 30
                  Bind:
    Ignored_server_ids: 0
                  Uuid:
           Retry_count: 1
 Enabled_auto_position: 1
          Channel_name: group_replication_recovery
           Tls_version:
2 rows in set (0.00 sec)

The table shows group operations rather than individual hosts connections. There is no origin information here.

Looking at the events, we will notice immediately some more differences.

node2 [localhost] {msandbox} (mysql) > show binlog events;
+------------------+------+----------------+-----------+-------------+-------------------------------------------------------------------------+
| Log_name         | Pos  | Event_type     | Server_id | End_log_pos | Info                                                                    |
+------------------+------+----------------+-----------+-------------+-------------------------------------------------------------------------+
| mysql-bin.000001 |    4 | Format_desc    |       102 |         123 | Server ver: 5.7.17-log, Binlog ver: 4                                   |
| mysql-bin.000001 |  123 | Previous_gtids |       102 |         150 |                                                                         |
| mysql-bin.000001 |  150 | Gtid           |       101 |         211 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:1'       |
| mysql-bin.000001 |  211 | Query          |       101 |         270 | BEGIN                                                                   |
| mysql-bin.000001 |  270 | View_change    |       101 |         369 | view_id=14850806532423012:1                                             |
| mysql-bin.000001 |  369 | Query          |       101 |         434 | COMMIT                                                                  |
| mysql-bin.000001 |  434 | Gtid           |       101 |         495 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:2'       |
| mysql-bin.000001 |  495 | Query          |       101 |         554 | BEGIN                                                                   |
| mysql-bin.000001 |  554 | View_change    |       101 |         693 | view_id=14850806532423012:2                                             |
| mysql-bin.000001 |  693 | Query          |       101 |         758 | COMMIT                                                                  |
| mysql-bin.000001 |  758 | Gtid           |       102 |         819 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:3'       |
| mysql-bin.000001 |  819 | Query          |       102 |         878 | BEGIN                                                                   |
| mysql-bin.000001 |  878 | View_change    |       102 |        1017 | view_id=14850806532423012:3                                             |
| mysql-bin.000001 | 1017 | Query          |       102 |        1082 | COMMIT                                                                  |
| mysql-bin.000001 | 1082 | Gtid           |       101 |        1143 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:4'       |
| mysql-bin.000001 | 1143 | Query          |       101 |        1250 | create schema if not exists test                                        |
| mysql-bin.000001 | 1250 | Gtid           |       101 |        1311 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:5'       |
| mysql-bin.000001 | 1311 | Query          |       101 |        1440 | DROP TABLE IF EXISTS `test`.`t1` /* generated by server */              |
| mysql-bin.000001 | 1440 | Gtid           |       101 |        1501 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:6'       |
| mysql-bin.000001 | 1501 | Query          |       101 |        1630 | create table test.t1(id int not null primary key, sid int)              |
| mysql-bin.000001 | 1630 | Gtid           |       101 |        1691 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:7'       |
| mysql-bin.000001 | 1691 | Query          |       101 |        1755 | BEGIN                                                                   |
| mysql-bin.000001 | 1755 | Table_map      |       101 |        1797 | table_id: 219 (test.t1)                                                 |
| mysql-bin.000001 | 1797 | Write_rows     |       101 |        1837 | table_id: 219 flags: STMT_END_F                                         |
| mysql-bin.000001 | 1837 | Xid            |       101 |        1864 | COMMIT /* xid=51 */                                                     |
| mysql-bin.000001 | 1864 | Gtid           |       102 |        1925 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:1000003' |
| mysql-bin.000001 | 1925 | Query          |       102 |        2032 | create schema if not exists test                                        |
| mysql-bin.000001 | 2032 | Gtid           |       102 |        2093 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:1000004' |
| mysql-bin.000001 | 2093 | Query          |       102 |        2222 | DROP TABLE IF EXISTS `test`.`t2` /* generated by server */              |
| mysql-bin.000001 | 2222 | Gtid           |       102 |        2283 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:1000005' |
| mysql-bin.000001 | 2283 | Query          |       102 |        2412 | create table test.t2(id int not null primary key, sid int)              |
| mysql-bin.000001 | 2412 | Gtid           |       102 |        2473 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:1000006' |
| mysql-bin.000001 | 2473 | Query          |       102 |        2542 | BEGIN                                                                   |
| mysql-bin.000001 | 2542 | Table_map      |       102 |        2584 | table_id: 220 (test.t2)                                                 |
| mysql-bin.000001 | 2584 | Write_rows     |       102 |        2624 | table_id: 220 flags: STMT_END_F                                         |
| mysql-bin.000001 | 2624 | Xid            |       102 |        2651 | COMMIT /* xid=62 */                                                     |
| mysql-bin.000001 | 2651 | Gtid           |       103 |        2712 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:2000003' |
| mysql-bin.000001 | 2712 | Query          |       103 |        2819 | create schema if not exists test                                        |
| mysql-bin.000001 | 2819 | Gtid           |       103 |        2880 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:2000004' |
| mysql-bin.000001 | 2880 | Query          |       103 |        3009 | DROP TABLE IF EXISTS `test`.`t3` /* generated by server */              |
| mysql-bin.000001 | 3009 | Gtid           |       103 |        3070 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:2000005' |
| mysql-bin.000001 | 3070 | Query          |       103 |        3199 | create table test.t3(id int not null primary key, sid int)              |
| mysql-bin.000001 | 3199 | Gtid           |       103 |        3260 | SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:2000006' |
| mysql-bin.000001 | 3260 | Query          |       103 |        3324 | BEGIN                                                                   |
| mysql-bin.000001 | 3324 | Table_map      |       103 |        3366 | table_id: 221 (test.t3)                                                 |
| mysql-bin.000001 | 3366 | Write_rows     |       103 |        3406 | table_id: 221 flags: STMT_END_F                                         |
| mysql-bin.000001 | 3406 | Xid            |       103 |        3433 | COMMIT /* xid=68 */                                                     |
+------------------+------+----------------+-----------+-------------+-------------------------------------------------------------------------+
47 rows in set (0.00 sec)

Two important points:

  • All transaction IDs are assigned to the group, not to the node. The only way to see where the data is coming from is to look at the binary log itself and check the good old server-id. One wonders why we have come all this way with the ugly UUIDs in the global transaction identifier only to maim their usefulness by removing one of the most important feature, which is tracking the data origin.

For example:

# at 434
#170122 11:24:11 server id 101  end_log_pos 495         GTID    last_committed=1        sequence_number=2
SET @@SESSION.GTID_NEXT= 'aaaaaaaa-bbbb-cccc-dddd-eeeeeeeeeeee:2'/*!*/;
# at 495
#170122 11:24:11 server id 101  end_log_pos 554         Query   thread_id=7     exec_time=6     error_code=0
SET TIMESTAMP=1485080651/*!*/;
BEGIN
/*!*/;
  • Because log-slave-updates is mandatory, the binary log in every node will have all the transactions of every other node. This can have disagreeable side effects when dealing with large data. Here is an example when we load the sample employee database from node #1:

With Group Replication, the load takes 2 minutes and 16 seconds, and the binary logs have the same size in every node.

[GR]$ ls -lh node?/data/*bin*
-rw-r-----  1 gmax  staff   8.2K Jan 22 10:22 node1/data/mysql-bin.000001
-rw-r-----  1 gmax  staff    63M Jan 22 10:24 node1/data/mysql-bin.000002
-rw-r-----  1 gmax  staff    38B Jan 22 10:22 node1/data/mysql-bin.index

-rw-r-----  1 gmax  staff    63M Jan 22 10:24 node2/data/mysql-bin.000001
-rw-r-----  1 gmax  staff    19B Jan 22 10:12 node2/data/mysql-bin.index

-rw-r-----  1 gmax  staff    63M Jan 22 10:24 node3/data/mysql-bin.000001
-rw-r-----  1 gmax  staff    19B Jan 22 10:12 node3/data/mysql-bin.index

The same operation in multi-source replication takes 1 minute and 30 seconds. The binary logs are kept only in the origin.

[MS]$ ls -lh node?/data/*bin*
-rw-r-----  1 gmax  staff   4.9K Jan 22 10:26 node1/data/mysql-bin.000001
-rw-r-----  1 gmax  staff    63M Jan 22 10:27 node1/data/mysql-bin.000002
-rw-r-----  1 gmax  staff    38B Jan 22 10:26 node1/data/mysql-bin.index

-rw-r-----  1 gmax  staff   1.4K Jan 22 10:14 node2/data/mysql-bin.000001
-rw-r-----  1 gmax  staff    19B Jan 22 10:14 node2/data/mysql-bin.index

-rw-r-----  1 gmax  staff   1.4K Jan 22 10:14 node3/data/mysql-bin.000001
-rw-r-----  1 gmax  staff    19B Jan 22 10:14 node3/data/mysql-bin.index

Conflict resolution

One of the strong points of MGR is conflict resolution.

We can try a conflicting operations in two nodes, inserting the same data at the same time:

use test;
set autocommit=0;
insert into t2 values (3, @@server_id);
commit;

In multi source, we get a replication error, on both nodes. It's an ugly result, but it tells the user immediately that something went wrong in a given node, and doesn't let the error propagate to other nodes.

In MGR, the situation varies. This is a possible outcome:

node1 [localhost] {msandbox} (test) > set autocommit=0;                        |   node2 [localhost] {msandbox} (test) > set autocommit=0;
Query OK, 0 rows affected (0.00 sec)                                           |   Query OK, 0 rows affected (0.00 sec)
                                                                               |
node1 [localhost] {msandbox} (test) > insert into t2 values (3, @@server_id);  |   node2 [localhost] {msandbox} (test) > insert into t2 values (3, @@server_id);
Query OK, 1 row affected (0.00 sec)                                            |   Query OK, 1 row affected (0.00 sec)
                                                                               |
node1 [localhost] {msandbox} (test) > select * from t2;                        |   node2 [localhost] {msandbox} (test) > select * from t2;
+----+------+                                                                  |   +----+------+
| id | sid  |                                                                  |   | id | sid  |
+----+------+                                                                  |   +----+------+
|  2 |  102 |                                                                  |   |  2 |  102 |
|  3 |  101 |                                                                  |   |  3 |  102 |
+----+------+                                                                  |   +----+------+
2 rows in set (0.00 sec)                                                       |   2 rows in set (0.00 sec)
                                                                               |
node1 [localhost] {msandbox} (test) > commit;                                  |   node2 [localhost] {msandbox} (test) > commit;
Query OK, 0 rows affected (0.01 sec)                                           |   ERROR 3101 (HY000): Plugin instructed the server to rollback the current transaction.
                                                                               |   node2 [localhost] {msandbox} (test) > select * from t2;
 node1 [localhost] {msandbox} (test) > select * from t2;                       |   +----+------+
 +----+------+                                                                 |   | id | sid  |
 | id | sid  |                                                                 |   +----+------+
 +----+------+                                                                 |   |  2 |  102 |
 |  2 |  102 |                                                                 |   |  3 |  101 |
 |  3 |  101 |                                                                 |   +----+------+
 +----+------+                                                                 |   2 rows in set (0.00 sec)
 2 rows in set (0.00 sec)                                                      |

Here node # 2 got the transaction a fraction of second later, and its transaction was rolled back. Thus the transaction that was ultimately kept in the database was the one from node1 (server-id 101.) However, this behavior is not predictable. If we try the same operation again, we get a different outcome:

node1 [localhost] {msandbox} (test) > insert into t2 values (4, @@server_id);  |   node2 [localhost] {msandbox} (test) > insert into t2 values (4, @@server_id);
Query OK, 1 row affected (0.00 sec)                                            |   Query OK, 1 row affected (0.00 sec)
                                                                               |
node1 [localhost] {msandbox} (test) > select * from t2;                        |   node2 [localhost] {msandbox} (test) > select * from t2;
+----+------+                                                                  |   +----+------+
| id | sid  |                                                                  |   | id | sid  |
+----+------+                                                                  |   +----+------+
|  2 |  102 |                                                                  |   |  2 |  102 |
|  3 |  101 |                                                                  |   |  3 |  101 |
|  4 |  101 |                                                                  |   |  4 |  102 |
+----+------+                                                                  |   +----+------+
3 rows in set (0.00 sec)                                                       |   3 rows in set (0.00 sec)
                                                                               |
node1 [localhost] {msandbox} (test) > commit;                                  |   node2 [localhost] {msandbox} (test) > commit;
Query OK, 0 rows affected (0.01 sec)                                           |
ERROR 3101 (HY000): Plugin instructed the server to rollback                   |
the current transaction.                                                       |
node1 [localhost] {msandbox} (test) > select * from t2;                        |   node2 [localhost] {msandbox} (test) > select * from t2;
+----+------+                                                                  |   +----+------+
| id | sid  |                                                                  |   | id | sid  |
+----+------+                                                                  |   +----+------+
|  2 |  102 |                                                                  |   |  2 |  102 |
|  3 |  101 |                                                                  |   |  3 |  101 |
|  4 |  102 |                                                                  |   |  4 |  102 |
+----+------+                                                                  |   +----+------+
4 rows in set (0.00 sec)                                                       |   3 rows in set (0.00 sec)

In the second attempt, the transaction was rolled back by node 1, and the surviving one is the one that was inserted from node 2. This means that conflict resolution works, but it may not be what the user wants, as the resolved conflict if aleatory.

Summing up

On the plus side, MGR keeps what it promises. We can set up a cluster of peer nodes and replicate data between nodes with some advantages compared to older multi-source topologies.

On the minus side, the documentation could be vastly improved, especially for multi-primary setup. Moreover, users need to be aware of the limitations, such as serializable isolation level and foreign keys with constraints not being supported.

Most important from my standpoint is the reduction of monitoring information for this technology, namely the loss of information about the data origin.

Wednesday, May 04, 2016

Docker for Mac beta and MySQL - First impressions

Using Docker for development is a great way of ensuring that what you develop will be the same that you deploy in production. This is true for almost everything. If you develop on Linux, the above statement holds. If you develop on a different operating system (OSX or Windows) there are several restrictions.

I showed one of those issues in a recent article (MySQL and Docker on a Mac: networking oddity.) When you want to export a port from a service running in the container, the exported port is not available in your mac, but in the virtual machine that runs Docker services. This happens with any application that listens to a port.

The second limitation I found affects only MySQL, and it is related to using volumes. The proper way of achieving data persistence with containers is through volumes, i.e. telling the container to run the data directory in a virtual path that refers to some safe place in the host computer. That can't be done on a Mac, because the host computer is a virtual machine, and even though Docker can access a folder in your Mac, the server installation fails for lack of permissions.

Both the above restrictions are lifted if you use the beta release of Docker for Mac and Windows. It's a private beta: you need to apply and wait to be given an operational token, but once you are in, you notice the differences between the beta and the "old" Docker-Toolbox:

Docker beta

  • The Docker app is a native app, which you install by copying its icon to the /Application folder;
  • You don't need Virtualbox or VMware Fusion. It comes with its own lightweight VM based on xhyve.
  • There is no need to run docker-machine start xxx and eval $(docker-machine env xxx). The new app is fully integrated with the OS.
  • Ports exported from a container are available in your Mac.
  • You can keep both the Docker Toolbox and the new Docker app in the same host, provided that you don't run them both in the same terminal session.

Back to our claim of lifted limitations: let's try a full installation on a Mac as we would do it on Linux.

$ docker run --name mybox -e MYSQL_ROOT_PASSWORD=secret -d \
    -v ~/docker/mysql/single:/var/lib/mysql \
    -p 5000:3306 mysql/mysql-server
72ca99918076ff0e5702514311cc706ffcc27f98917f211e98ed187dfda3b47b

$ ls  ~/docker/mysql/single/
auto.cnf    client-key.pem  ibdata1     mysql.sock.lock    server-cert.pem
ca-key.pem  ib_buffer_pool  ibtmp1      performance_schema server-key.pem
ca.pem      ib_logfile0     mysql       private_key.pem    sys
client-cert.pem             ib_logfile1 mysql.sock         public_key.pem

We create a MySQL server container with the internal port 3306 exposed to the external port 5000, and the data directory running in the host directory $HOME/docker/mysql/single. It seems that the data directory was created correctly. Now we use a MySQL client on the Mac to connect to the container, using port 5000 on the local network address (Note: there is NO database server running on my mac. Only in the container).

$ sudo netstat -atn  |grep LISTEN | grep 5000
tcp4       0      0  *.5000                 *.*                    LISTEN

$ ~/opt/mysql/5.7.12/bin/mysql -h 127.0.0.1  -u root -psecret -P 5000
mysql: [Warning] Using a password on the command line interface can be insecure.
Welcome to the MySQL monitor.  Commands end with ; or \g.
Your MySQL connection id is 2
Server version: 5.7.12 MySQL Community Server (GPL)

Copyright (c) 2000, 2016, Oracle and/or its affiliates. All rights reserved.

Oracle is a registered trademark of Oracle Corporation and/or its
affiliates. Other names may be trademarks of their respective
owners.

Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.

mysql> create schema hello_docker;
Query OK, 1 row affected (0.01 sec)

mysql> use hello_docker
Database changed
mysql> create table i_am_here(id int);
Query OK, 0 rows affected (0.03 sec)

mysql> exit
Bye

$ ls  ~/docker/mysql/single/hello_docker/
db.opt        i_am_here.frm    i_am_here.ibd

This is full integration! Using a Mac client we connected to the container, where we created a table, which then appeared inside the data directory in the Mac host!

It's still early to say if this beta is ready for more serious work, but the first impressions are really good!

Monday, May 02, 2016

Taking the MySQL document store for a spin

This is not a comprehensive review, nor an user guide. It's a step-by-step account of my initial impressions while trying the new MySQL XProtocol and the document store capabilities. In fact, I am barely scratching the surface here: more articles will come as time allows.

MySQL 5.7 has been GA for several months, as it was released in October 2015. Among the many features and improvements, I was surprised to see the MySQL team emphasizing the JSON data type. While it is an interesting feature per se, I failed to see the reason why so many articles and conference talks were focused around this single feature. Everything became clear when, with the release of MySQL 5.7.12, the MySQL team announced a new release model.

Overview

In MySQL 5.7.12, we get the usual MySQL server, which shouldn't have new features. However, in an attempt to combine the stability of the server with a more dynamic release cycle, the server ships with a new plugin, unimaginatively named X-Plugin, which supports an alternative communication protocol, named X-Protocol.

In short, the X-Protocol extends and replaces the traditional client/server protocol, by allowing asynchronous communication to the server, using different API calls, which are available, as of today, in Javascript, Python, C#, and Java, with more languages to come.

The reason for this decision is easy to see. Many developers struggle with relational tables and SQL, while they understand structures made of arrays and associative arrays (maps.) This is also one of the reasons for the recent popularity of NoSQL databases, where schemas and tables are replaced by collections of documents or similar schema-less structures. With this new release, MySQL wants to offer the best of two worlds, by allowing developers to use the database with the tools they feel most comfortable with.

To use the new plugin, you need two components:

  • The plugin itself, which ships with the server package, but is not enabled by default;
  • The MySQL shell, a new command line tool that you have to download and install separately and will allow you to use Javascript or Python with the database.

As a QA professional, I am a bit concerned about this mix of GA and alpha features (The MySQL shell is defined as alpha software. and the shell itself says development preview in its help). Theoretically, the two worlds should be separated. If you don't install the plugin, the server should work as usual. But practice and experience tell me that there are dangers waiting for a chance to destroy our data. If you want a single piece of advice to summarize this article, DON'T USE the new MySQL shell with a production server. That said, let's start a quick tour.

Installation

You need to install the shell, which comes in a package that is different from the rest of MySQL products. The manual shows how to install it on OSX or Linux. The only mention that this product could be dangerous to use is a note reminding the user to enable the MySQL Preview Packages when installing from a Linux repository. The procedure, on any operating system, will install library and executables globally. Unlike the server package, it is not possible to install it in a user-defined directory, like you install the server with MySQL Sandbox. In this context, the standard Oracle disclaimer may have a meaning that goes beyond a regular CYA.

Next, you need to enable the plugin. You can do it in three ways:

(1)

$ mysqlsh --classic -u youruser -p --dba enableXProtocol
mysqlx: [Warning] Using a password on the command line interface can be insecure.
Creating a Classic Session to youruser@localhost:3306
Enter password:
No default schema selected.

enableXProtocol: Installing plugin mysqlx...
enableXProtocol: done

(2)

Start the server with --plugin-load=mysqlx=mysqlx.so. This will enable the plugin, although it does not seem to work the way it should.

(3)

Enable the plugin with a SQL command.

mysql> install plugin mysqlx soname 'mysqlx.so';

I prefer method #3 because is the only one that does not have side effects or misunderstanding. The issue that hit me when I tried method #1 for the first time is that calling mysqlsh --classic uses the client/server protocol on port 3306 (or the port that you defined for the database) while subsequent calls will use the X-Protocol on port 33060.

Alternatives. Using Docker

If what I said previously has made you cautious and you have decided not to use the shell in your main computer (as you should), there are alternative ways. If you have a data center at your disposal, just fire a virtual machine and play with it. However, be aware that the MySQL shell does not install in Ubuntu 15.04 and 16.04.

A lightweight method to try on the new shell without endangering your production server is to use a Docker image for MySQL, or a combination of MySQL Sandbox and Docker.

In Docker, the MySQL shell does not ship together with the server. It requires a separate image. A quick guide is available in a recent article. I don't like the current approach: having two images is a waste of space. It would be acceptable if the images were based on a slim Linux distribution, such as Alpine. Since they run on OracleLinux, instead, you need to download two beefy images to start testing. With a fast internet connection this should not be a problem, but if you live in a place where 3 MBPS is the norm or if you are traveling, this could become an annoyance. Once you have pulled the images, you can use them at will, even without internet connection.

The above mentioned quick guide suggests using docker run --link to connect the two containers. I recommend a different approach, as the link option is now considered legacy.

$ docker network create mynet
edcc36be21e54cdb91fdc91f2c320efabf62d36ab9d31b0142e901da7e3c84e9
$ docker network ls
NETWORK ID          NAME                DRIVER
a64b55fb7c92        bridge              bridge
0b8a52002dfd        none                null
cc775ec7edab        host                host
edcc36be21e5        mynet               bridge

$ docker run --name mybox  -e MYSQL_ROOT_PASSWORD=secret -d --net mynet mysql/mysql-server:5.7.12 \
    --plugin-load=mysqlx=mysqlx.so
ecbfc322bb17ec0b1511ea7321c2b10f9c7b5091baee4240ab51b7bf77c1e424

$ docker run -it --net mynet mysql/shell -u root -h mybox -p
Creating an X Session to root@mybox:33060
Enter password:
No default schema selected.

Welcome to MySQL Shell 1.0.3 Development Preview

Copyright (c) 2016, Oracle and/or its affiliates. All rights reserved.

Oracle is a registered trademark of Oracle Corporation and/or its
affiliates. Other names may be trademarks of their respective
owners.

Type '\help', '\h' or '\?' for help.

Currently in JavaScript mode. Use \sql to switch to SQL mode and execute queries.
mysql-js>

The first command creates a network (called mynet).

The second command creates the server container, which is launched using the network mynet and with the plugin-load option (which seems to work well with the docker image). When you use a docker network, the container name is recognized by the network as an host name, and can be called by other members of the network. This is much cleaner than using --link.

The third command runs the MySQL shell, using the same network. This allows us to use the container name (mybox) without any other options.

Running the MySQL Javascript shell

My favorite setup for this test is a mix of MySQL Sandbox for the server and Docker for the shell. This way I can use the alpha shell without polluting my Linux host and use a feature rich MySQL Sandbox to control the server.

Here is what I do:

$ make_sandbox 5.7.12 -- --no_show -c general_log=1 -c general_log_file=general.log

I start a sandbox with MySQL 5.7.12 (tarball expanded and renamed into /opt/mysql/5.7.12), with the general log enabled. We need this to peek under the hood when we use the document store.

Next, we load the sample world_x database from the MySQL documentation page.

$ ~/sandboxes/msb_5_7_12/use  -e 'source world_x.sql'

Finally, we enable the plugin.

$ ~/sandboxes/msb_5_7_12/use  -e "install plugin mysqlx soname 'mysqlx.so'"

Now we can connect the shell:

$ docker run -it --net host mysql/shell -u msandbox -pmsandbox world_x
mysqlx: [Warning] Using a password on the command line interface can be insecure.
Creating an X Session to msandbox@localhost:33060/world_x
Default schema `world_x` accessible through db.

Welcome to MySQL Shell 1.0.3 Development Preview

Copyright (c) 2016, Oracle and/or its affiliates. All rights reserved.

Oracle is a registered trademark of Oracle Corporation and/or its
affiliates. Other names may be trademarks of their respective
owners.

Type '\help', '\h' or '\?' for help.

Currently in JavaScript mode. Use \sql to switch to SQL mode and execute queries.
mysql-js>

What have we done? We use the network named 'host', which is a standard Docker protocol that lets a container use the host environment. We don't need to specify a port, since the shell assumes 33060 (enabled by the X-Plugin). The username and password are the usual ones for a sandbox. We enter inside a Javascript shell, where we can communicate with the database server using an alternative syntax. Let's see what we have:

  • We have an "X-Session" using port 33060 and working on database world_x;
  • There is a help, same as in the MySQL client;
  • The database world_x is accessible through the variable db.
  • Note: all the commands used below are the same for Python and Javascript. There are differences only when using the language extensively.

With the above elements, we can try getting data from the database.

mysql-js> db.collections
{
    "CountryInfo": <Collection:CountryInfo>
}

mysql-js> db.tables
{
    "City": <Table:City>,
    "Country": <Table:Country>,
    "CountryLanguage": <Table:CountryLanguage>
}

What does it mean? Let's abandon the Javascript shell and look at the traditional client:

mysql [localhost] {msandbox} (world_x) > show tables;
+-------------------+
| Tables_in_world_x |
+-------------------+
| City              |
| Country           |
| CountryInfo       |
| CountryLanguage   |
+-------------------+
4 rows in set (0.00 sec)

Here we see 4 tables, while the Javascript console lists only 3. However, the fourth table has the same name as the "collection." Let's have a look:

mysql [localhost] {msandbox} (world_x) > desc CountryInfo;
+-------+-------------+------+-----+---------+------------------+
| Field | Type        | Null | Key | Default | Extra            |
+-------+-------------+------+-----+---------+------------------+
| doc   | json        | YES  |     | NULL    |                  |
| _id   | varchar(32) | YES  |     | NULL    | STORED GENERATED |
+-------+-------------+------+-----+---------+------------------+
2 rows in set (0.00 sec)

mysql [localhost] {msandbox} (world_x) > show create table CountryInfo\G
*************************** 1. row ***************************
       Table: CountryInfo
Create Table: CREATE TABLE `CountryInfo` (
  `doc` json DEFAULT NULL,
  `_id` varchar(32) GENERATED ALWAYS AS (json_unquote(json_extract(`doc`,'$._id'))) STORED
) ENGINE=InnoDB DEFAULT CHARSET=utf8
1 row in set (0.00 sec)

Look what we got! A JSON column with a dynamic index implemented as a virtual column. Now we can appreciate why the JSON data type was such an important thing.

Back to the Javascript shell, let's get something from the database. (You can get all the commands I am using, and much more, from the manual.)

mysql-js> db.collections.CountryInfo.find("_id='USA'")
[
    {
        "GNP": 8510700,
        "IndepYear": 1776,
        "Name": "United States",
        "_id": "USA",
        "demographics": {
            "LifeExpectancy": 77.0999984741211,
            "Population": 278357000
        },
        "geography": {
            "Continent": "North America",
            "Region": "North America",
            "SurfaceArea": 9363520
        },
        "government": {
            "GovernmentForm": "Federal Republic",
            "HeadOfState": "George W. Bush"
        }
    }
]
1 document in set (0.00 sec)

Apart from the feeling of being back in the good old times when MySQL was still playing with IPO dreams (look at the HeadOfState field in the above data), this record is a straightforward JSON document, where data that should belong to different normalized tables are bundled together in this unified view. So, we are really querying a Table that contains JSON data associated with an _id. We know because the general log lists what happens after our simple query:

SELECT doc FROM `world_x`.`CountryInfo` WHERE (`_id` = 'USA')

Let's try a more complex query. We want all countries in Oceania with a population of more than 150,000 people, and whose Head of State is Elisabeth II. The query is a bit intimidating, albeit eerily familiar:

mysql-js> db.collections.CountryInfo.find("government.HeadOfState='Elisabeth II' AND geography.Continent = 'Oceania' AND demographics.Population > 150000").fields(["Name", "demographics.Population","geography.Continent"])
[
    {
        "Name": "Australia",
        "demographics.Population": 18886000,
        "geography.Continent": "Oceania"
    },
    {
        "Name": "New Zealand",
        "demographics.Population": 3862000,
        "geography.Continent": "Oceania"
    },
    {
        "Name": "Papua New Guinea",
        "demographics.Population": 4807000,
        "geography.Continent": "Oceania"
    },
    {
        "Name": "Solomon Islands",
        "demographics.Population": 444000,
        "geography.Continent": "Oceania"
    }
]
4 documents in set (0.00 sec)

Here is the corresponding SQL query recorder in the general log:

SELECT JSON_OBJECT(
    'Name', JSON_EXTRACT(doc,'$.Name'),'demographics.Population', \
    JSON_EXTRACT(doc,'$.demographics.Population'),'geography.Continent', \
    JSON_EXTRACT(doc,'$.geography.Continent')
) AS doc 
FROM `world_x`.`CountryInfo` \
WHERE (
    ((JSON_EXTRACT(doc,'$.government.HeadOfState') = 'Elisabeth II') \
    AND (JSON_EXTRACT(doc,'$.geography.Continent') = 'Oceania')) \
    AND (JSON_EXTRACT(doc,'$.demographics.Population') > 150000)
    )

I am not sure which one I prefer. The SQL looks strange, with all those JSON functions, while the Javascript command seems more readable (I had never thought I would say what I have just said!)

Enough with reading data. I want to manipulate some. I'll start by creating a new collection.

 mysql-js> db.createCollection('somethingNew')
 <Collection:somethingNew>

And the general log shows what should not be a surprise, as we have seen a similar structure for CountryInfo:

CREATE TABLE `world_x`.`somethingNew` (doc JSON, \
_id VARCHAR(32) \
    GENERATED ALWAYS AS (JSON_UNQUOTE(JSON_EXTRACT(doc, '$._id'))) \
    STORED NOT NULL UNIQUE
) CHARSET utf8mb4 ENGINE=InnoDB

Now, to the data manipulation:

mysql-js> mynew=db.getCollection('somethingNew')
<Collection:somethingNew>

The variable mynew can access the new collection. It's a shortcut to avoid db.collections.somethingNew

mysql-js> db.collections
{
    "CountryInfo": <Collection:CountryInfo>,
    "somethingNew": <Collection:somethingNew>
}
mysql-js> mynew.find()
Empty set (0.00 sec)

As expected, there is nothing inside the new collection. Now we enter a very minimal record.

mysql-js> mynew.add({Name:'Joe'})
Query OK, 1 item affected (0.01 sec)

mysql-js> mynew.find()
[
    {
        "Name": "Joe",
        "_id": "e09ef177c50fe6110100b8aeed734276"
    }
]
1 document in set (0.00 sec)

The collection contains more than what we have inserted. There is an apparently auto-generated _id field. Looking at the general log, we see that the data includes the new field.

INSERT INTO `world_x`.`somethingNew` (doc) VALUES ('{\"Name\":\"Joe\",\"_id\":\"e09ef177c50fe6110100b8aeed734276\"}')

As you can see, an _id field was added automatically. We could override that behavior by providing our own value:

mysql-js> mynew.add({_id: "a dummy string", Name:"Frank", country: "UK"})

The data inserted now includes the _id filed with our manual value. The general log says:

INSERT INTO `world_x`.`somethingNew` (doc) VALUES ('{\"Name\":\"Frank\",\"_id\":\"a dummy string\",\"country\":\"UK\"}')

The value of _id, however, must be unique, or the engine will generate an error:

mysql-js> mynew.add({_id: "a dummy string", Name:"Sam", country: "USA"})
MySQL Error (5116): Document contains a field value that is not unique but required to be

If all this gives you a sense of deja-vu, you're right. This feels and smells a lot like MongoDB, and I am sure it isn't a coincidence.

Synchronizing operations

As our last attempt for the day, we will see what happens when we manipulate data in SQL and then retrieve it in Javascript or Python.

We leave the JS console open, and we do something in SQL

mysql [localhost] {msandbox} (world_x) > drop table somethingNew;
Query OK, 0 rows affected (0.01 sec)

How does it look like on the other side?

mysql-js> db.collections
{
    "CountryInfo": <Collection:CountryInfo>,
    "somethingNew": <Collection:somethingNew>
}
mysql-js> db.getCollections()
{
    "CountryInfo": <Collection:CountryInfo>,
    "somethingNew": <Collection:somethingNew>
}

Oops! mysqlsh didn't get the memo! It still considers somethingNew to be available.

mysql-js> db.collections.somethingNew.find()
MySQL Error (1146): Table 'world_x.somethingNew' doesn't exist

We need to refresh the connection. Unlike the SQL client, you need to specify the connection parameters.

mysql-js> \connect msandbox:msandbox@localhost:33060/world_x
Closing old connection...
Creating an X Session to msandbox@localhost:33060/world_x
Default schema `world_x` accessible through db.

mysql-js> db.collections
{
    "CountryInfo": <Collection:CountryInfo>
}

We can see the same happening when we create a new table in SQL. The session in mysqlsh keeps showing the cached contents, and we need to refresh the session to see the changes. Looking at the general log, there are no changes when we issue commands asking for metadata, such as db.collections or db.tables. Instead, when we refresh the session, we see this:

SELECT table_name, COUNT(table_name) c FROM information_schema.columns \
   WHERE ((column_name = 'doc' and data_type = 'json') 
   OR (column_name = '_id' and generation_expression = 'json_unquote(json_extract(`doc`,''$._id''))')) \
   AND table_schema = 'world_x' GROUP BY table_name HAVING c = 2
SHOW FULL TABLES FROM `world_x`

The first query lists all tables that contain a JSON document and a generated _id (these are the collections). The second one lists all tables. Then the shell removes from the table list all the ones that were in the collections list.

Given the way it is done, we can cheat the system easily by creating something that looks like a collection, but has extra fields:

CREATE TABLE strangedoc (doc JSON, \
_id VARCHAR(32) \
    GENERATED ALWAYS AS (JSON_UNQUOTE(JSON_EXTRACT(doc, '$._id'))) \
    STORED NOT NULL UNIQUE,
    secret_stash varchar(200),
    more_secret_info mediumtext
) CHARSET utf8mb4 ENGINE=InnoDB;

mysql [localhost] {msandbox} (world_x) > insert into strangedoc (doc,secret_stash,more_secret_info) values \
('{"_id": "abc", "name": "Susan"}', \
'and now for something completely different', \
'Lorem ipsum dolor sit amet, consectetur adipisicing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.');
Query OK, 1 row affected (0.00 sec)

mysql [localhost] {msandbox} (world_x) > select * from strangedoc\G
*************************** 1. row ***************************
             doc: {"_id": "abc", "name": "Susan"}
             _id: abc
    secret_stash: and now for something completely different
more_secret_info: Lorem ipsum dolor sit amet, consectetur adipisicing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.
1 row in set (0.00 sec)

And the Javascript console will be unaware of the extra material:

mysql-js> db.collections
{
    "CountryInfo": <Collection:CountryInfo>,
    "strangedoc": <Collection:strangedoc>
}
mysql-js> db.strangedoc.find()
[
    {
        "_id": "abc",
        "name": "Susan"
    }
]
1 document in set (0.00 sec)

We can add contents to the collection in Javascript, and the database server won't protest (provided that the extra fields are nullable or have a default value). Is it a bug or a feature?

Parting thoughts

As I have said at the beginning, this is a very simple exploration. More work is required to test the full potential of the new model. My impressions are mildly positive. On one hand, it's an exciting environment, which promises to expand to better usefulness with more programming languages and possibly better coordination between shell and server software. On the other hand, there are many bugs, and the software is still very green. It will require more iterations from the community and the development team before it could be trusted with important data.

Tuesday, January 07, 2014

Multiple masters : attraction to the stars

In the last 10 years I have worked a lot with replication systems, and I have developed a keen interest in the topic of multiple masters in a single cluster. My interest has a two distinct origins:

  • On one hand, I have interacted countless times with users who want to use a replication system as a drop-in replacement for a single server. In many cases, especially when users are dealing with applications that are not much flexible or modular, this means that the replication system must have several points of data entry, and such points must work independently and in symbiosis with the rest of the nodes.
  • On the other hand, I am a technology lover (look it up in the dictionary: it is spelled geek), and as such I get my curiosity stirred whenever I discover a new possibility of implementing multi-master systems.

The double nature of this professional curiosity makes me sometimes forget that the ultimate goal of technology is to improve the users life. I may fall in love with a cute design or a clever implementation of an idea, but that cleverness must eventually meet with usability, or else it loses its appeal. There are areas where the distinction between usefulness and cleverness is clear cut. And there are others where we really don’t know where we stand because there are so many variables involved.

One of such cases is a star topology, where you have many master nodes, which are connected to each other through a hub. You can consider it a bi-directional master/slave. If you take a master/slave topology, and make every node able to replicate back to the master, then you have almost a star. To make it complete, you also need to add the ability of the master of broadcasting the changes received from the outside nodes, so that every node gets the changes from every other node. Compared to other popular topologies, say point-to-point all-masters, and circular replication, the star topology has the distinct advantage of requiring less connections, and of making it very easy to add a new node.

Star

Figure #1: Star topology

However, anyone can see immediately one disadvantage of the star topology: the hub is the cornerstone of the cluster. It’s a single point of failure (SPOF). If the hub fails, there is no replication anywhere. Period. Therefore, when you are considering a multi-master topology, you have to weigh in the advantages and disadvantages of the star, and usually you consider the SPOF as the most important element to consider.

Depending on which technology you choose, though, there is also another important element to consider, i.e. that data must be replicated twice when you use a star topology. It’s mostly the same thing that happens in a circular replication. If you have nodes A, B, C, and D, and you write data in A, the data is replicated three times before it reaches D (A->B, B->C, and C->D). A star topology is similar. In a system where A, B, and D are terminal nodes, and C is the hub, data needs to travel twice before it reaches D (A->C, C->D). Circular replication

Figure #2: Circular replication

This double transfer is bad for two reasons: it affects performance, and it opens to the risk of unexpected transformations of data. Let’s explore this concept a bit. When we replicate data from a master to a slave, there is little risk of mischief. The data goes from the source to a reproducer. If we use row-based-replication, there is little risk of getting the wrong data in the slave. If we make the slave replicate to a further slave, we need to apply the data, generate a further binary log in the slave host, and replicate data from that second binary log. We can deal with that, but at the price of taking into account more details, like where the data came from, when to stop replicating in a loop, whether the data was created with a given configuration set, and so on. In short, if your slave server has been configured differently from the master, chances are that the data down the line may be different. In a star topology, this translates into the possibility of data in each spoke to be replicated correctly in the hub, but to be possibly different in the other spokes.

Compare this with a point-to-point all-masters. In this topology, there are no SPOFs. You pay for this privilege by having to set a higher number of connections between nodes (every node must connect to every other node), but there is no second hand replication. Before being applied to the slave service, the data is applied only once in the originating master.

Point to point all masters

Figure #2: Point-to-point all-masters topology

Where do I want to go from all the above points? I have reached the conclusion that, much as user like star topologies, because of their simplicity, I find myself often recommending the more complex but more solid point-t-point all-masters setup. Admittedly, the risk of data corruption is minimal. The real spoiler in most scenarios is performance. When users realize that the same load will flow effortlessly in a point-to-point scenario, but cause slave lags in a star topology, then the choice is easy to make. If you use row-based replication, and in a complex topology it is often a necessary requirement, the lag grows to a point where it becomes unbearable.

As I said in the beginning, all depends on the use case: if the data load is not too big, a star topology will run just as fine as point-to-point, and if the data flow is well designed, the risk of bad data transformation becomes negligible. Yet, the full extent of star topologies weaknesses must be taken into account when designing a new system. Sometimes, investing some effort into deploying a point-to-point all-masters topology pays off in the medium to long term. Of course, you can prove that only if you deploy a star and try it out with the same load. If you deploy it on a staging environment, no harm is done. If you deploy in production, then you may regret. In the end, it all boils down to my mantra: don’t trust the theory, but test, test, test.

Tuesday, March 12, 2013

Sessions at Percona Live MySQL Conference 2013: fun, competition, novelties, and a free pass

Percona Live MySQL Conference and Expo, April 22-25, 2013

The Percona Live MySQL Conference and Expo 2013 is almost 1 month away. It's time to start planning, set the expectations, and decide what to attend. This post will give a roundup of some of the sessions that I recommend attending and I look forward to.

First, the unexpected!

After much talk and disbelief, here they come! Oracle engineers will participate to the Percona Live conference. This is wonderful! Their participation was requested by the organizers, by the attendees, and by community advocates, who all told the Oracle management how important it is to be in this conference. Finally, they have agreed to come along, and here they are, with one keynote and three general sessions.

My talks

I will be a speaker at the conference, and thus it's no surprise that I will recommend my talks.

My company's talks

Continuent is very active at many conferences, and at this one we are participating massively. I know I look partial in this matter, but I am really proud of the products that we create and maintain at my company. That's why I highly recommend these talks.

Competing with whom?

MySQL is a standard, and widely popular. Yet, it has shortcomings and weak points, which allow for alternative solutions to flourish. There are many sessions that offer alternatives to the vanilla software.

  • [Tue 1:20pm] MariaDB Cassandra Interoperability. MariaDB is a magnetic fork of MySQL. It's magnetic in the sense that it attract most of the features or enhancements that nobody else wanted to accept. While some of its features may look like a whim (and some of them have been discontinued already), there are some that look more interesting than others. This integration with Cassandra deserves some exploration.
  • [Tue 3:50pm] MySQL Cluster - When to use it and when not to. The classic MySQL Cluster. Some believe that it's a drop-in replacement for a single server. It's not. It's a powerful solution, but it is not fit for all.
  • [Wed 11:10am] Fine Tuning Percona XtraBackup to your workload. This tool has become a de-facto standard. It is available everywhere, easy to use, and powerful. A great tale of an alternative tool that became the standard.
  • [Thu 9:00am] MySQL, YourSQL, NoSQL, NewSQL - the state of the MySQL ecosystem While all the keynotes are worth attending, this one is special. If you want to understand the MySQL world, Matt Aslett can draw a quite useful map for you.

New and renewed technologies

There are many interesting talks about new things, or old technologies with a new twist.

Tales from the trenches

Win a free pass

Percona is offering free passes for community participation. One of them is available to readers of this blog and I will be the judge.

To get a free pass, do the following:

  1. Blog, tweet, or post on another public media about this conference;
  2. Leave a comment here, with a link to your post;
  3. The free pass will be given to the most useful or pleasant post;
  4. Make sure there is a way to reach you by email or twitter;
Please notice:
  • I will award the free pass to the post that I like most. The adjudication will be entirely subjective.
  • Deadline: March 20th, 2013.

Wednesday, October 07, 2009

Introduction to Gearman at the Italian Research Council


Introduction to Gearman

I was invited to contribute some technological views at the Italian National Research Center, during the Internet Governance Forum.
My contribution was ahigh level introduction to Gearman, which sparked a debate about the impact of the cloud on the future of open source. Indeed, cloud computing technologies have the potential of harming open source adoption. If this is a threat and how much it can affect the future of open source depends on the business model behind the cloud.

More interesting topics were discussed both during the scheduled sessions and in open gathering. During dinner, for example, I got some disturbing statistics on database teaching in Italian universities. It's very common to require MS Access and .NET as supporting technologies for most of the IT related exams, with little or no room for open alternatives like MySQL and PostgreSQL.
Seeing a newsstand inside the compound of the NRC makes me think that progress slow in the institution that is supposed to be the guide of the Italian technology. The same thought crossed my mind seeing that the conference hall, a beautiful 200 seat hall well equipped for multimedia has only one power socket, but it was off limits for users.